Ordination ========== The ordination module provides various ordination methods commonly used in community ecology. .. currentmodule:: nuee.ordination NMDS (Non-metric Multidimensional Scaling) ------------------------------------------- .. autofunction:: metaMDS .. autoclass:: NMDS :members: :undoc-members: :show-inheritance: RDA (Redundancy Analysis) -------------------------- .. autofunction:: rda .. autoclass:: RDA :members: :undoc-members: :show-inheritance: CCA (Canonical Correspondence Analysis) ---------------------------------------- .. autofunction:: cca .. autoclass:: CCA :members: :undoc-members: :show-inheritance: PCA (Principal Component Analysis) ----------------------------------- .. autofunction:: pca .. autoclass:: PCA :members: :undoc-members: :show-inheritance: Environmental Fitting --------------------- .. autofunction:: envfit Procrustes Analysis ------------------- .. autofunction:: procrustes Variable Selection ------------------ .. autofunction:: ordistep Base Classes ------------ .. autoclass:: OrdinationResult :members: :undoc-members: :show-inheritance: .. autoclass:: OrdinationMethod :members: :undoc-members: :show-inheritance: